SDAS Manual
search
Ctrlk
Github
  • Stereo Data Analysis Solution (SDAS) User Manualchevron-right
    • Software Introduction
    • Installation Guide
    • Quick Start
    • Instructions for Each Functional Modulechevron-right
      • SDAS Input Data Format Description
      • Performance Test Environment and Data Description
      • Data Processingchevron-right
      • Cell Type Annotationchevron-right
        • Introduction
        • h5ad Data Format Description
        • cell2location Algorithmchevron-right
        • RCTD Algorithm
        • Tangram Algorithm
        • SCimilarity Algorithmchevron-right
        • SPOTlight Algorithm
        • Performance Test
      • Spatial Domain Identificationchevron-right
      • Cellular Neighborhood Analysischevron-right
      • CNV Analysischevron-right
      • Spatial Gene Co-expressionchevron-right
      • Differential Gene Analysischevron-right
      • Gene Set Enrichment Analysischevron-right
      • Protein Interaction Network Analysischevron-right
      • Cell Communication Analysischevron-right
      • Trajectory Analysischevron-right
      • Transcription Factor Analysischevron-right
      • Cell-type Spatial Relationship Analysischevron-right
      • Public Bulk Database Validationchevron-right
    • Pipeline Examplechevron-right
    • Release Notes
    • Supportchevron-right
gitbookPowered by GitBook
block-quoteOn this pagechevron-down
  1. Stereo Data Analysis Solution (SDAS) User Manualchevron-right
  2. Instructions for Each Functional Module

Cell Type Annotation

Introductionchevron-righth5ad Data Format Descriptionchevron-rightcell2location Algorithmchevron-rightRCTD Algorithmchevron-rightTangram Algorithmchevron-rightSCimilarity Algorithmchevron-rightSPOTlight Algorithmchevron-rightPerformance Testchevron-right
PreviousCommand Descriptionchevron-leftNextIntroductionchevron-right

Last updated 5 months ago