Performance Test
Running Time and Memory Usage
Recommendation: pyscenic building transcription factor and gene co-expression networks requires random forest algorithms. When the number of cells increases, running time and memory increase exponentially. It is recommended to filter target cells first before analysis.
Running time and memory are proportional to the number of cells, the more cells, the higher resource requirements
It is recommended to filter target cell subpopulations first before analysis
Reference performance (n_cpus=24)
Sample
Cell Count
Running Time(h)
Memory(G)
sample1
20629
7.8
23
sample2
21500
13.7
29
sample3
81843
23
79
sample4
84510
37.5
108
sample5
321856
>96
>200
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